IL_5CZZ_004
3D structure
- PDB id
- 5CZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Staphylococcus aureus Cas9 in complex with sgRNA and target DNA (TTGAAT PAM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CTATTC*GAATAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5CZZ|1|C|DC|1
5CZZ|1|C|DT|2
5CZZ|1|C|DA|3
5CZZ|1|C|DT|4
5CZZ|1|C|DT|5
5CZZ|1|C|DC|6
*
5CZZ|1|D|DG|3
5CZZ|1|D|DA|4
5CZZ|1|D|DA|5
5CZZ|1|D|DT|6
5CZZ|1|D|DA|7
5CZZ|1|D|DG|8
Current chains
- Chain C
- DNA (28-MER)
- Chain D
- DNA (5'-D(*TP*TP*GP*AP*AP*TP*AP*G)-3')
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9
Coloring options: