IL_5DAT_203

3D structure

PDB id

5DAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of yeast 80S ribosome with hypusine-containing eIF5A

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

AAAUAG*CUUCUU

Length

12 nucleotides

Bulged bases

5DAT|1|2|A|1346, 5DAT|1|2|U|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DAT|1|2|A|1344
5DAT|1|2|A|1345
5DAT|1|2|A|1346
5DAT|1|2|U|1347
5DAT|1|2|A|1348
5DAT|1|2|G|1349
*
5DAT|1|2|C|1376
5DAT|1|2|U|1377
5DAT|1|2|U|1378
5DAT|1|2|C|1379
5DAT|1|2|U|1380
5DAT|1|2|U|1381

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C6

40S ribosomal protein S16-A

Chain D0

40S ribosomal protein S20