IL_5DAT_327

3D structure

PDB id

5DAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of yeast 80S ribosome with hypusine-containing eIF5A

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GACAUAGA*UUUAUAGUU

Length

17 nucleotides

Bulged bases

5DAT|1|5|A|2502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DAT|1|5|G|2442
5DAT|1|5|A|2443
5DAT|1|5|C|2444
5DAT|1|5|A|2445
5DAT|1|5|U|2446
5DAT|1|5|A|2447
5DAT|1|5|G|2448
5DAT|1|5|A|2449
*
5DAT|1|5|U|2497
5DAT|1|5|U|2498
5DAT|1|5|U|2499
5DAT|1|5|A|2500
5DAT|1|5|U|2501
5DAT|1|5|A|2502
5DAT|1|5|G|2503
5DAT|1|5|U|2504
5DAT|1|5|U|2505

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain s1

40S ribosomal protein S1-A