IL_5DAT_491

3D structure

PDB id

5DAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of yeast 80S ribosome with hypusine-containing eIF5A

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CCUUGAGU*GCUCUUGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DAT|1|6|C|708
5DAT|1|6|C|709
5DAT|1|6|U|710
5DAT|1|6|U|711
5DAT|1|6|G|712
5DAT|1|6|A|713
5DAT|1|6|G|714
5DAT|1|6|U|715
*
5DAT|1|6|G|723
5DAT|1|6|C|724
5DAT|1|6|U|725
5DAT|1|6|C|726
5DAT|1|6|U|727
5DAT|1|6|U|728
5DAT|1|6|G|729
5DAT|1|6|G|730

Current chains

Chain 6

18S ribosomal RNA

Nearby chains