IL_5DAT_494
3D structure
- PDB id
- 5DAT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of yeast 80S ribosome with hypusine-containing eIF5A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CACAAUAAGGAUUG*CUUGAUUUUGUG
- Length
- 26 nucleotides
- Bulged bases
- 5DAT|1|6|G|1228, 5DAT|1|6|U|1257
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DAT|1|6|C|1220
5DAT|1|6|A|1221
5DAT|1|6|C|1222
5DAT|1|6|A|1223
5DAT|1|6|A|1224
5DAT|1|6|U|1225
5DAT|1|6|A|1226
5DAT|1|6|A|1227
5DAT|1|6|G|1228
5DAT|1|6|G|1229
5DAT|1|6|A|1230
5DAT|1|6|U|1231
5DAT|1|6|U|1232
5DAT|1|6|G|1233
*
5DAT|1|6|C|1252
5DAT|1|6|U|1253
5DAT|1|6|U|1254
5DAT|1|6|G|1255
5DAT|1|6|A|1256
5DAT|1|6|U|1257
5DAT|1|6|U|1258
5DAT|1|6|U|1259
5DAT|1|6|U|1260
5DAT|1|6|G|1261
5DAT|1|6|U|1262
5DAT|1|6|G|1263
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c0
- 40S ribosomal protein S10-A
- Chain c2
- 40S ribosomal protein S12
- Chain d9
- 40S ribosomal protein S29-A
- Chain e1
- Ubiquitin-40S ribosomal protein S31
Coloring options: