IL_5DC3_240
3D structure
- PDB id
- 5DC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of yeast 80S ribosome with non-modified eIF5A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UGGGGC*GUUCUUUGUA
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DC3|1|5|U|169
5DC3|1|5|G|170
5DC3|1|5|G|171
5DC3|1|5|G|172
5DC3|1|5|G|173
5DC3|1|5|C|174
*
5DC3|1|5|G|244
5DC3|1|5|U|245
5DC3|1|5|U|246
5DC3|1|5|C|247
5DC3|1|5|U|248
5DC3|1|5|U|249
5DC3|1|5|U|250
5DC3|1|5|G|251
5DC3|1|5|U|252
5DC3|1|5|A|253
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain M3
- 60S ribosomal protein L13-A
- Chain l8
- 60S ribosomal protein L8-A
- Chain m3
- 60S ribosomal protein L13-A
- Chain o5
- 60S ribosomal protein L35-A
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