IL_5DC3_337

3D structure

PDB id

5DC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of yeast 80S ribosome with non-modified eIF5A

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

GUGG*CUUUUU

Length

10 nucleotides

Bulged bases

5DC3|1|5|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DC3|1|5|G|2828
5DC3|1|5|U|2829
5DC3|1|5|G|2830
5DC3|1|5|G|2831
*
5DC3|1|5|C|2857
5DC3|1|5|U|2858
5DC3|1|5|U|2859
5DC3|1|5|U|2860
5DC3|1|5|U|2861
5DC3|1|5|U|2862

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l3

60S ribosomal protein L3

Chain m0

60S ribosomal protein L10