IL_5DFE_143
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 5DFE|1|RA|G|2116, 5DFE|1|RA|A|2117
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5DFE_143 not in the Motif Atlas
- Homologous match to IL_7RQB_085
- Geometric discrepancy: 0.4126
- The information below is about IL_7RQB_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DFE|1|RA|G|2110
5DFE|1|RA|C|2111
5DFE|1|RA|G|2112
5DFE|1|RA|U|2113
5DFE|1|RA|A|2114
5DFE|1|RA|G|2115
5DFE|1|RA|G|2116
5DFE|1|RA|A|2117
5DFE|1|RA|U|2118
5DFE|1|RA|A|2119
5DFE|1|RA|G|2120
*
5DFE|1|RA|C|2178
5DFE|1|RA|C|2179
Current chains
- Chain RA
- T23S rRNA
Nearby chains
No other chains within 10ÅColoring options: