IL_5DGE_249
3D structure
- PDB id
- 5DGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- CAGACAUGGCUGGG*CAUAAUG
- Length
- 21 nucleotides
- Bulged bases
- 5DGE|1|5|G|443, 5DGE|1|5|U|620
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DGE|1|5|C|435
5DGE|1|5|A|436
5DGE|1|5|G|437
5DGE|1|5|A|438
5DGE|1|5|C|439
5DGE|1|5|A|440
5DGE|1|5|U|441
5DGE|1|5|G|442
5DGE|1|5|G|443
5DGE|1|5|C|491
5DGE|1|5|U|492
5DGE|1|5|G|493
5DGE|1|5|G|494
5DGE|1|5|G|495
*
5DGE|1|5|C|618
5DGE|1|5|A|619
5DGE|1|5|U|620
5DGE|1|5|A|621
5DGE|1|5|A|622
5DGE|1|5|U|623
5DGE|1|5|G|624
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l6
- 60S ribosomal protein L6-A
- Chain o2
- 60S ribosomal protein L32
- Chain o3
- 60S ribosomal protein L33-A
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