IL_5E7K_083

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

5E7K|1|14|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5E7K_083 not in the Motif Atlas

Homologous match to IL_7RQB_019

Geometric discrepancy: 0.0934

The information below is about IL_7RQB_019

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

5E7K|1|14|C|697
5E7K|1|14|C|698
*
5E7K|1|14|G|763
5E7K|1|14|A|764
5E7K|1|14|G|765

Current chains

Chain 14

23S rRNA

Nearby chains

Chain 19

50S ribosomal protein L2