IL_5E7K_117
3D structure
- PDB id
- 5E7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GCC*GAGC
- Length
- 7 nucleotides
- Bulged bases
- 5E7K|1|14|A|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5E7K_117 not in the Motif Atlas
- Geometric match to IL_4V9K_064
- Geometric discrepancy: 0.3568
- The information below is about IL_4V9K_064
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
5E7K|1|14|G|1449|||A
5E7K|1|14|C|1450
5E7K|1|14|C|1451
*
5E7K|1|14|G|1459
5E7K|1|14|A|1460
5E7K|1|14|G|1461
5E7K|1|14|C|1462
Current chains
- Chain 14
- 23S rRNA
Nearby chains
- Chain 55
- 50S ribosomal protein L17
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