IL_5E7K_232

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AGUUGCCAGC*GGGCACUCU

Length

19 nucleotides

Bulged bases

5E7K|1|1G|U|1125, 5E7K|1|1G|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1G|A|1123
5E7K|1|1G|G|1124
5E7K|1|1G|U|1125
5E7K|1|1G|U|1126
5E7K|1|1G|G|1127
5E7K|1|1G|C|1128
5E7K|1|1G|C|1129
5E7K|1|1G|A|1130
5E7K|1|1G|G|1131
5E7K|1|1G|C|1132
*
5E7K|1|1G|G|1142
5E7K|1|1G|G|1143
5E7K|1|1G|G|1144
5E7K|1|1G|C|1145
5E7K|1|1G|A|1146
5E7K|1|1G|C|1147
5E7K|1|1G|U|1148
5E7K|1|1G|C|1149
5E7K|1|1G|U|1150

Current chains

Chain 1G

16S rRNA

Nearby chains

Chain 1A

30S ribosomal protein S10

Chain 82

30S ribosomal protein S9