IL_5E7K_353

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CACGGCGUCAAGCCGGUAAG*CGAGG

Length

25 nucleotides

Bulged bases

5E7K|1|1H|U|2797, 5E7K|1|1H|C|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1H|C|2789
5E7K|1|1H|A|2790
5E7K|1|1H|C|2791
5E7K|1|1H|G|2792
5E7K|1|1H|G|2793
5E7K|1|1H|C|2794
5E7K|1|1H|G|2795
5E7K|1|1H|U|2797
5E7K|1|1H|C|2798
5E7K|1|1H|A|2799
5E7K|1|1H|A|2801
5E7K|1|1H|G|2802
5E7K|1|1H|C|2803
5E7K|1|1H|C|2804
5E7K|1|1H|G|2805
5E7K|1|1H|G|2807
5E7K|1|1H|U|2808
5E7K|1|1H|A|2809
5E7K|1|1H|A|2810
5E7K|1|1H|G|2811
*
5E7K|1|1H|C|2889
5E7K|1|1H|G|2891
5E7K|1|1H|A|2892
5E7K|1|1H|G|2893
5E7K|1|1H|G|2894

Current chains

Chain 1H

23S rRNA

Nearby chains

Chain 21

50S ribosomal protein L3