IL_5E7K_378

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGUAGA*UCCGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|14|U|858
5E7K|1|14|G|859
5E7K|1|14|U|860
5E7K|1|14|A|861
5E7K|1|14|G|862
5E7K|1|14|A|863
*
5E7K|1|14|U|913
5E7K|1|14|C|914
5E7K|1|14|C|915
5E7K|1|14|G|916
5E7K|1|14|A|917
5E7K|1|14|A|918
5E7K|1|14|G|919

Current chains

Chain 14

23S rRNA

Nearby chains

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 45

50S ribosomal protein L16

Chain D5

50S ribosomal protein L25

Chain E5

50S ribosomal protein L27

Chain H5

50S ribosomal protein L30