IL_5E7K_391
3D structure
- PDB id
- 5E7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGGG*CUU
- Length
- 7 nucleotides
- Bulged bases
- 5E7K|1|1G|G|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5E7K_391 not in the Motif Atlas
- Geometric match to IL_6IA2_002
- Geometric discrepancy: 0.1555
- The information below is about IL_6IA2_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
5E7K|1|1G|G|925
5E7K|1|1G|G|926
5E7K|1|1G|G|927
5E7K|1|1G|G|928
*
5E7K|1|1G|C|1389
5E7K|1|1G|U|1390
5E7K|1|1G|U|1391
Current chains
- Chain 1G
- 16S rRNA
Nearby chains
- Chain 42
- 30S ribosomal protein S5
- Chain 4L
- mRNA
Coloring options: