3D structure

PDB id
5E7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUGGGAGCCUGUGAACCC*GGGGAGGCGCCGGUGAAAUACCAC
Length
42 nucleotides
Bulged bases
5E7K|1|1H|U|2132, 5E7K|1|1H|C|2161, 5E7K|1|1H|U|2167
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5E7K|1|1H|G|2121
5E7K|1|1H|U|2122
5E7K|1|1H|G|2123
5E7K|1|1H|G|2124
5E7K|1|1H|G|2125
5E7K|1|1H|A|2126
5E7K|1|1H|G|2127
5E7K|1|1H|C|2128
5E7K|1|1H|C|2129
5E7K|1|1H|U|2130
5E7K|1|1H|G|2131
5E7K|1|1H|U|2132
5E7K|1|1H|G|2133
5E7K|1|1H|A|2134
5E7K|1|1H|A|2135
5E7K|1|1H|C|2136
5E7K|1|1H|C|2137
5E7K|1|1H|C|2138
*
5E7K|1|1H|G|2154
5E7K|1|1H|G|2155
5E7K|1|1H|G|2156
5E7K|1|1H|G|2157
5E7K|1|1H|A|2158
5E7K|1|1H|G|2159
5E7K|1|1H|G|2160
5E7K|1|1H|C|2161
5E7K|1|1H|G|2162
5E7K|1|1H|C|2163
5E7K|1|1H|C|2164
5E7K|1|1H|G|2165
5E7K|1|1H|G|2166
5E7K|1|1H|U|2167
5E7K|1|1H|G|2168
5E7K|1|1H|A|2169
5E7K|1|1H|A|2170
5E7K|1|1H|A|2171
5E7K|1|1H|U|2172
5E7K|1|1H|A|2173
5E7K|1|1H|C|2174
5E7K|1|1H|C|2175
5E7K|1|1H|A|2176
5E7K|1|1H|C|2177

Current chains

Chain 1H
23S rRNA

Nearby chains

Chain 3K
Transfer RNA; tRNA
Chain 71
50S ribosomal protein L1

Coloring options:

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