IL_5E7K_402

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAAC*GGUGCCCCGCGAGGGGAGC

Length

23 nucleotides

Bulged bases

5E7K|1|13|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|13|G|1003
5E7K|1|13|A|1004
5E7K|1|13|A|1005
5E7K|1|13|C|1006
*
5E7K|1|13|G|1023
5E7K|1|13|G|1024
5E7K|1|13|U|1025
5E7K|1|13|G|1026
5E7K|1|13|C|1027
5E7K|1|13|C|1028
5E7K|1|13|C|1028|||A
5E7K|1|13|C|1028|||B
5E7K|1|13|G|1029
5E7K|1|13|C|1030
5E7K|1|13|G|1031
5E7K|1|13|A|1032
5E7K|1|13|G|1032|||A
5E7K|1|13|G|1032|||B
5E7K|1|13|G|1033
5E7K|1|13|G|1034
5E7K|1|13|A|1035
5E7K|1|13|G|1036
5E7K|1|13|C|1037

Current chains

Chain 13

16S rRNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3