IL_5E81_043

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GAAC*GGUGCCCCGCGAGGGGAGC

Length

23 nucleotides

Bulged bases

5E81|1|13|C|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|13|G|1003
5E81|1|13|A|1004
5E81|1|13|A|1005
5E81|1|13|C|1006
*
5E81|1|13|G|1023
5E81|1|13|G|1024
5E81|1|13|U|1025
5E81|1|13|G|1026
5E81|1|13|C|1027
5E81|1|13|C|1028
5E81|1|13|C|1028|||A
5E81|1|13|C|1028|||B
5E81|1|13|G|1029
5E81|1|13|C|1030
5E81|1|13|G|1031
5E81|1|13|A|1032
5E81|1|13|G|1032|||A
5E81|1|13|G|1032|||B
5E81|1|13|G|1033
5E81|1|13|G|1034
5E81|1|13|A|1035
5E81|1|13|G|1036
5E81|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA

Chain 2E

30S ribosomal protein S3