IL_5E81_117

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

5E81|1|14|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5E81_117 not in the Motif Atlas

Homologous match to IL_7RQB_056

Geometric discrepancy: 0.2103

The information below is about IL_7RQB_056

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

5E81|1|14|U|1433
5E81|1|14|A|1434
5E81|1|14|G|1435
*
5E81|1|14|C|1557
5E81|1|14|A|1558
5E81|1|14|G|1559
5E81|1|14|G|1560

Current chains

Chain 14

23S ribosomal RNA

Nearby chains