IL_5E81_151

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CCUGUGAACC*GGGAGG

Length

16 nucleotides

Bulged bases

5E81|1|14|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|14|C|2128
5E81|1|14|C|2129
5E81|1|14|U|2130
5E81|1|14|G|2131
5E81|1|14|U|2132
5E81|1|14|G|2133
5E81|1|14|A|2134
5E81|1|14|A|2135
5E81|1|14|C|2136
5E81|1|14|C|2137
*
5E81|1|14|G|2155
5E81|1|14|G|2156
5E81|1|14|G|2157
5E81|1|14|A|2158
5E81|1|14|G|2159
5E81|1|14|G|2160

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 79

50S ribosomal protein L1