IL_5E81_173

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CACGGCGUCAAGCCGGUAAG*CGAGG

Length

25 nucleotides

Bulged bases

5E81|1|14|U|2797, 5E81|1|14|C|2798, 5E81|1|14|A|2799

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|14|C|2789
5E81|1|14|A|2790
5E81|1|14|C|2791
5E81|1|14|G|2792
5E81|1|14|G|2793
5E81|1|14|C|2794
5E81|1|14|G|2795
5E81|1|14|U|2797
5E81|1|14|C|2798
5E81|1|14|A|2799
5E81|1|14|A|2801
5E81|1|14|G|2802
5E81|1|14|C|2803
5E81|1|14|C|2804
5E81|1|14|G|2805
5E81|1|14|G|2807
5E81|1|14|U|2808
5E81|1|14|A|2809
5E81|1|14|A|2810
5E81|1|14|G|2811
*
5E81|1|14|C|2889
5E81|1|14|G|2891
5E81|1|14|A|2892
5E81|1|14|G|2893
5E81|1|14|G|2894

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L3