IL_5E81_409

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

5E81|1|1H|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|1H|C|1043
5E81|1|1H|G|1044
5E81|1|1H|A|1045
5E81|1|1H|A|1046
5E81|1|1H|G|1047
5E81|1|1H|A|1048
5E81|1|1H|C|1049
5E81|1|1H|A|1050
5E81|1|1H|G|1051
5E81|1|1H|C|1052
5E81|1|1H|C|1053
*
5E81|1|1H|G|1106
5E81|1|1H|G|1107
5E81|1|1H|U|1108
5E81|1|1H|C|1109
5E81|1|1H|G|1110
5E81|1|1H|A|1111
5E81|1|1H|G|1112

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6