IL_5EL4_091

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

AGCACUG*CAAACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|14|A|863
5EL4|1|14|G|864
5EL4|1|14|C|865
5EL4|1|14|A|866
5EL4|1|14|C|867
5EL4|1|14|U|868
5EL4|1|14|G|869
*
5EL4|1|14|C|908
5EL4|1|14|A|909
5EL4|1|14|A|910
5EL4|1|14|A|911
5EL4|1|14|C|912
5EL4|1|14|U|913

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 45

50S ribosomal protein L16

Chain D5

50S ribosomal protein L25