IL_5EL4_192
3D structure
- PDB id
- 5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGA*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GGA,UCC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL4_192 not in the Motif Atlas
- Geometric match to IL_5TBW_079
- Geometric discrepancy: 0.2063
- The information below is about IL_5TBW_079
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
5EL4|1|1G|G|406
5EL4|1|1G|G|407
5EL4|1|1G|A|408
*
5EL4|1|1G|U|434
5EL4|1|1G|C|435
5EL4|1|1G|C|436
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
Coloring options: