IL_5EL4_193

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

AGGAAGAAG*UGUAAACU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|1G|A|408
5EL4|1|1G|G|409
5EL4|1|1G|G|410
5EL4|1|1G|A|411
5EL4|1|1G|A|412
5EL4|1|1G|G|413
5EL4|1|1G|A|414
5EL4|1|1G|A|415
5EL4|1|1G|G|416
*
5EL4|1|1G|U|427
5EL4|1|1G|G|428
5EL4|1|1G|U|429
5EL4|1|1G|A|430
5EL4|1|1G|A|431
5EL4|1|1G|A|432
5EL4|1|1G|C|433
5EL4|1|1G|U|434

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 32

30S ribosomal protein S4