IL_5EL4_319
3D structure
- PDB id
- 5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CGCCUG*CUGGCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL4_319 not in the Motif Atlas
- Geometric match to IL_6O5F_001
- Geometric discrepancy: 0.3814
- The information below is about IL_6O5F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
5EL4|1|1H|C|2105
5EL4|1|1H|G|2106
5EL4|1|1H|C|2107
5EL4|1|1H|C|2108
5EL4|1|1H|U|2109
5EL4|1|1H|G|2110
*
5EL4|1|1H|C|2179
5EL4|1|1H|U|2180
5EL4|1|1H|G|2181
5EL4|1|1H|G|2182
5EL4|1|1H|C|2183
5EL4|1|1H|G|2184
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 3K
- Transfer RNA; tRNA
- Chain 71
- 50S ribosomal protein L1
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