IL_5EL4_372

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGCCCCCAAGUCUG*CAGCGCC

Length

21 nucleotides

Bulged bases

5EL4|1|14|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|14|G|1002
5EL4|1|14|G|1003
5EL4|1|14|C|1004
5EL4|1|14|C|1005
5EL4|1|14|C|1006
5EL4|1|14|C|1007
5EL4|1|14|C|1008
5EL4|1|14|A|1009
5EL4|1|14|A|1010
5EL4|1|14|G|1011
5EL4|1|14|U|1012
5EL4|1|14|C|1013
5EL4|1|14|U|1014
5EL4|1|14|G|1015
*
5EL4|1|14|C|1147
5EL4|1|14|A|1148
5EL4|1|14|G|1149
5EL4|1|14|C|1150
5EL4|1|14|G|1151
5EL4|1|14|C|1152
5EL4|1|14|C|1153

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 85

50S ribosomal protein L20