IL_5EL4_373

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGCUAAGUG*CUUAAGCC

Length

17 nucleotides

Bulged bases

5EL4|1|14|U|1142, 5EL4|1|14|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|14|G|1016
5EL4|1|14|G|1017
5EL4|1|14|C|1018
5EL4|1|14|U|1019
5EL4|1|14|A|1020
5EL4|1|14|A|1021
5EL4|1|14|G|1022
5EL4|1|14|U|1023
5EL4|1|14|G|1024
*
5EL4|1|14|C|1140
5EL4|1|14|U|1141
5EL4|1|14|U|1142
5EL4|1|14|A|1142|||A
5EL4|1|14|A|1143
5EL4|1|14|G|1144
5EL4|1|14|C|1145
5EL4|1|14|C|1146

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 59

50S ribosomal protein L6