IL_5EL4_404

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

5EL4|1|1G|G|1127, 5EL4|1|1G|C|1129

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|1G|G|1124
5EL4|1|1G|U|1125
5EL4|1|1G|U|1126
5EL4|1|1G|G|1127
5EL4|1|1G|C|1128
5EL4|1|1G|C|1129
5EL4|1|1G|A|1130
5EL4|1|1G|G|1131
5EL4|1|1G|C|1132
*
5EL4|1|1G|G|1142
5EL4|1|1G|G|1143
5EL4|1|1G|G|1144
5EL4|1|1G|C|1145
5EL4|1|1G|A|1146
5EL4|1|1G|C|1147
5EL4|1|1G|U|1148
5EL4|1|1G|C|1149

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1A

30S ribosomal protein S10

Chain 82

30S ribosomal protein S9