IL_5EL5_102

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CCCCCAAGUC*GCG

Length

13 nucleotides

Bulged bases

5EL5|1|14|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|14|C|1004
5EL5|1|14|C|1005
5EL5|1|14|C|1006
5EL5|1|14|C|1007
5EL5|1|14|C|1008
5EL5|1|14|A|1009
5EL5|1|14|A|1010
5EL5|1|14|G|1011
5EL5|1|14|U|1012
5EL5|1|14|C|1013
*
5EL5|1|14|G|1149
5EL5|1|14|C|1150
5EL5|1|14|G|1151

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 85

50S ribosomal protein L20