IL_5EL5_147

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GCGCCUGCUAGGAUAGG*CCCUGGCGC

Length

26 nucleotides

Bulged bases

5EL5|1|14|C|2111

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|14|G|2104
5EL5|1|14|C|2105
5EL5|1|14|G|2106
5EL5|1|14|C|2107
5EL5|1|14|C|2108
5EL5|1|14|U|2109
5EL5|1|14|G|2110
5EL5|1|14|C|2111
5EL5|1|14|U|2113
5EL5|1|14|A|2114
5EL5|1|14|G|2115
5EL5|1|14|G|2116
5EL5|1|14|A|2117
5EL5|1|14|U|2118
5EL5|1|14|A|2119
5EL5|1|14|G|2120
5EL5|1|14|G|2121
*
5EL5|1|14|C|2177
5EL5|1|14|C|2178
5EL5|1|14|C|2179
5EL5|1|14|U|2180
5EL5|1|14|G|2181
5EL5|1|14|G|2182
5EL5|1|14|C|2183
5EL5|1|14|G|2184
5EL5|1|14|C|2185

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA

Chain 3L

Transfer RNA; tRNA