IL_5EL5_171

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CACGGCGUCAAGCCGGUAAG*CGAGG

Length

25 nucleotides

Bulged bases

5EL5|1|14|U|2797, 5EL5|1|14|C|2798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|14|C|2789
5EL5|1|14|A|2790
5EL5|1|14|C|2791
5EL5|1|14|G|2792
5EL5|1|14|G|2793
5EL5|1|14|C|2794
5EL5|1|14|G|2795
5EL5|1|14|U|2797
5EL5|1|14|C|2798
5EL5|1|14|A|2799
5EL5|1|14|A|2801
5EL5|1|14|G|2802
5EL5|1|14|C|2803
5EL5|1|14|C|2804
5EL5|1|14|G|2805
5EL5|1|14|G|2807
5EL5|1|14|U|2808
5EL5|1|14|A|2809
5EL5|1|14|A|2810
5EL5|1|14|G|2811
*
5EL5|1|14|C|2889
5EL5|1|14|G|2891
5EL5|1|14|A|2892
5EL5|1|14|G|2893
5EL5|1|14|G|2894

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L3

Chain A5

50S ribosomal protein L22