IL_5EL5_207
3D structure
- PDB id
- 5EL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GUC*GAUAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL5_207 not in the Motif Atlas
- Geometric match to IL_6DME_002
- Geometric discrepancy: 0.3455
- The information below is about IL_6DME_002
- Detailed Annotation
- 8-nt loop receptor
- Broad Annotation
- Loop-receptor motif
- Motif group
- IL_36516.3
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
5EL5|1|1G|G|597
5EL5|1|1G|U|598
5EL5|1|1G|C|599
*
5EL5|1|1G|G|639
5EL5|1|1G|A|640
5EL5|1|1G|U|641
5EL5|1|1G|A|642
5EL5|1|1G|C|643
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 72
- 30S ribosomal protein S8
- Chain 8A
- 30S ribosomal protein S17
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