IL_5EL5_209

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

UGAAAGACCA*UGGGGGAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|1G|U|605
5EL5|1|1G|G|606
5EL5|1|1G|A|607
5EL5|1|1G|A|608
5EL5|1|1G|A|609
5EL5|1|1G|G|610
5EL5|1|1G|A|611
5EL5|1|1G|C|612
5EL5|1|1G|C|613
5EL5|1|1G|A|614
*
5EL5|1|1G|U|626
5EL5|1|1G|G|627
5EL5|1|1G|G|628
5EL5|1|1G|G|629
5EL5|1|1G|G|630
5EL5|1|1G|G|631
5EL5|1|1G|A|632
5EL5|1|1G|G|633

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 32

30S ribosomal protein S4

Chain 72

30S ribosomal protein S8

Chain 7A

30S ribosomal protein S16