IL_5EL5_374

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CAUCAGC*GCGACGACG

Length

16 nucleotides

Bulged bases

5EL5|1|13|U|244, 5EL5|1|13|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|13|C|242
5EL5|1|13|A|243
5EL5|1|13|U|244
5EL5|1|13|C|245
5EL5|1|13|A|246
5EL5|1|13|G|247
5EL5|1|13|C|248
*
5EL5|1|13|G|276
5EL5|1|13|C|277
5EL5|1|13|G|278
5EL5|1|13|A|279
5EL5|1|13|C|280
5EL5|1|13|G|281
5EL5|1|13|A|282
5EL5|1|13|C|283
5EL5|1|13|G|284

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 3I

30S ribosomal protein S12

Chain 8I

30S ribosomal protein S17