IL_5EL5_419

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CCUGUGAACCCCC*GGGGGGGAGG

Length

23 nucleotides

Bulged bases

5EL5|1|14|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|14|C|2128
5EL5|1|14|C|2129
5EL5|1|14|U|2130
5EL5|1|14|G|2131
5EL5|1|14|U|2132
5EL5|1|14|G|2133
5EL5|1|14|A|2134
5EL5|1|14|A|2135
5EL5|1|14|C|2136
5EL5|1|14|C|2137
5EL5|1|14|C|2138
5EL5|1|14|C|2139
5EL5|1|14|C|2140
*
5EL5|1|14|G|2151
5EL5|1|14|G|2152
5EL5|1|14|G|2153
5EL5|1|14|G|2154
5EL5|1|14|G|2155
5EL5|1|14|G|2156
5EL5|1|14|G|2157
5EL5|1|14|A|2158
5EL5|1|14|G|2159
5EL5|1|14|G|2160

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA