IL_5EL6_369

3D structure

PDB id

5EL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GACAACCC*GGGCUAAUC

Length

17 nucleotides

Bulged bases

5EL6|1|13|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL6|1|13|G|148
5EL6|1|13|A|149
5EL6|1|13|C|150
5EL6|1|13|A|151
5EL6|1|13|A|152
5EL6|1|13|C|153
5EL6|1|13|C|154
5EL6|1|13|C|155
*
5EL6|1|13|G|166
5EL6|1|13|G|167
5EL6|1|13|G|168
5EL6|1|13|C|169
5EL6|1|13|U|170
5EL6|1|13|A|171
5EL6|1|13|A|172
5EL6|1|13|U|173
5EL6|1|13|C|174

Current chains

Chain 13

16S rRNA

Nearby chains

Chain BI

30S ribosomal protein S20