IL_5EL7_198
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGACG*CGUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5EL7_198 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.5834
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
5EL7|1|1G|G|446
5EL7|1|1G|G|447
5EL7|1|1G|A|448
5EL7|1|1G|C|449
5EL7|1|1G|G|450
*
5EL7|1|1G|C|483
5EL7|1|1G|G|484
5EL7|1|1G|U|486
5EL7|1|1G|A|487
5EL7|1|1G|C|488
Current chains
- Chain 1G
- 16S rRNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 7A
- 30S ribosomal protein S16
Coloring options: