3D structure

PDB id
5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
Experimental method
X-RAY DIFFRACTION
Resolution
3.15 Å

Loop

Sequence
GCGUAGGAUAG*CC
Length
13 nucleotides
Bulged bases
5EL7|1|1H|C|2111, 5EL7|1|1H|U|2118
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5EL7|1|1H|G|2110
5EL7|1|1H|C|2111
5EL7|1|1H|G|2112
5EL7|1|1H|U|2113
5EL7|1|1H|A|2114
5EL7|1|1H|G|2115
5EL7|1|1H|G|2116
5EL7|1|1H|A|2117
5EL7|1|1H|U|2118
5EL7|1|1H|A|2119
5EL7|1|1H|G|2120
*
5EL7|1|1H|C|2178
5EL7|1|1H|C|2179

Current chains

Chain 1H
23S rRNA

Nearby chains

Chain 3K
Transfer RNA; tRNA
Chain 71
50S ribosomal protein L1

Coloring options:

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