IL_5EL7_385

3D structure

PDB id

5EL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GACAUGCU*AGCAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL7|1|1G|G|993
5EL7|1|1G|A|994
5EL7|1|1G|C|995
5EL7|1|1G|A|996
5EL7|1|1G|U|997
5EL7|1|1G|G|998
5EL7|1|1G|C|998|||A
5EL7|1|1G|U|999
*
5EL7|1|1G|A|1041
5EL7|1|1G|G|1042
5EL7|1|1G|C|1043
5EL7|1|1G|A|1044
5EL7|1|1G|C|1045

Current chains

Chain 1G

16S rRNA

Nearby chains

Chain 5A

30S ribosomal protein S14 type Z