IL_5EL7_399

3D structure

PDB id

5EL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GAAACCCC*GGGACUGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL7|1|13|G|450
5EL7|1|13|A|451
5EL7|1|13|A|452
5EL7|1|13|A|453
5EL7|1|13|C|454
5EL7|1|13|C|455
5EL7|1|13|C|456
5EL7|1|13|C|457
*
5EL7|1|13|G|475
5EL7|1|13|G|476
5EL7|1|13|G|477
5EL7|1|13|A|478
5EL7|1|13|C|479
5EL7|1|13|U|480
5EL7|1|13|G|481
5EL7|1|13|A|482
5EL7|1|13|C|483

Current chains

Chain 13

16S rRNA

Nearby chains

Chain 7I

30S ribosomal protein S16