IL_5FCI_026
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGAUG*CGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCI_026 not in the Motif Atlas
- Homologous match to IL_8P9A_254
- Geometric discrepancy: 0.1013
- The information below is about IL_8P9A_254
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
5FCI|1|1|C|758
5FCI|1|1|U|759
5FCI|1|1|G|760
5FCI|1|1|A|761
5FCI|1|1|U|762
5FCI|1|1|G|763
*
5FCI|1|1|C|768
5FCI|1|1|G|769
5FCI|1|1|G|770
5FCI|1|1|A|771
5FCI|1|1|U|772
5FCI|1|1|G|773
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain M3
- 60S ribosomal protein L13-A
- Chain N8
- 60S ribosomal protein L28
- Chain Q2
- 60S ribosomal protein L42-A
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