IL_5FCI_160
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCI_160 not in the Motif Atlas
- Homologous match to IL_8P9A_392
- Geometric discrepancy: 0.4009
- The information below is about IL_8P9A_392
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47074.2
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
5FCI|1|2|U|318
5FCI|1|2|U|319
5FCI|1|2|U|320
5FCI|1|2|C|321
5FCI|1|2|G|322
5FCI|1|2|A|323
*
5FCI|1|2|U|345
5FCI|1|2|G|346
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain C1
- 40S ribosomal protein S11-A,40S ribosomal protein S11-A (uS17)
- Chain M9
- 60S ribosomal protein L19-A
- Chain S8
- 40S ribosomal protein S8-A
Coloring options: