IL_5FCI_192
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGGAU*GCACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCI_192 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3343
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
5FCI|1|2|G|1040
5FCI|1|2|G|1041
5FCI|1|2|G|1042
5FCI|1|2|A|1043
5FCI|1|2|U|1044
*
5FCI|1|2|G|1074
5FCI|1|2|C|1075
5FCI|1|2|A|1076
5FCI|1|2|C|1077
5FCI|1|2|C|1078
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C3
- 40S ribosomal protein S13
- Chain D1
- 40S ribosomal protein S21-A
- Chain D2
- 40S ribosomal protein S22-A
- Chain D6
- 40S ribosomal protein S26-A
- Chain D7
- 40S ribosomal protein S27-A
- Chain S0
- 40S ribosomal protein S0-A
- Chain S1
- 40S ribosomal protein S1-A
Coloring options: