IL_5FCI_212

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

AAAUAG*CUUCUU

Length

12 nucleotides

Bulged bases

5FCI|1|2|A|1346, 5FCI|1|2|U|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|2|A|1344
5FCI|1|2|A|1345
5FCI|1|2|A|1346
5FCI|1|2|U|1347
5FCI|1|2|A|1348
5FCI|1|2|G|1349
*
5FCI|1|2|C|1376
5FCI|1|2|U|1377
5FCI|1|2|U|1378
5FCI|1|2|C|1379
5FCI|1|2|U|1380
5FCI|1|2|U|1381

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C6

40S ribosomal protein S16-A

Chain C9

40S ribosomal protein S19-A

Chain D0

40S ribosomal protein S20