IL_5FCI_236
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAAGCA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCI_236 not in the Motif Atlas
- Homologous match to IL_8P9A_365
- Geometric discrepancy: 0.1268
- The information below is about IL_8P9A_365
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18487.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5FCI|1|3|G|21
5FCI|1|3|A|22
5FCI|1|3|A|23
5FCI|1|3|A|24
5FCI|1|3|G|25
5FCI|1|3|C|26
5FCI|1|3|A|27
*
5FCI|1|3|U|53
5FCI|1|3|U|54
5FCI|1|3|A|55
5FCI|1|3|A|56
5FCI|1|3|G|57
5FCI|1|3|C|58
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain L5
- 60S ribosomal protein L5
- Chain M1
- 60S ribosomal protein L11-A
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