IL_5FCI_517
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUGUCUUCGGACUCUUUG*CAU
- Length
- 34 nucleotides
- Bulged bases
- 5FCI|1|6|U|232, 5FCI|1|6|U|238, 5FCI|1|6|C|239, 5FCI|1|6|U|240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FCI|1|6|A|213
5FCI|1|6|G|214
5FCI|1|6|A|215
5FCI|1|6|U|216
5FCI|1|6|A|217
5FCI|1|6|A|218
5FCI|1|6|A|219
5FCI|1|6|A|220
5FCI|1|6|A|221
5FCI|1|6|A|222
5FCI|1|6|U|223
5FCI|1|6|C|224
5FCI|1|6|A|225
5FCI|1|6|A|226
5FCI|1|6|U|227
5FCI|1|6|G|228
5FCI|1|6|U|229
5FCI|1|6|C|230
5FCI|1|6|U|231
5FCI|1|6|U|232
5FCI|1|6|C|233
5FCI|1|6|G|234
5FCI|1|6|G|235
5FCI|1|6|A|236
5FCI|1|6|C|237
5FCI|1|6|U|238
5FCI|1|6|C|239
5FCI|1|6|U|240
5FCI|1|6|U|241
5FCI|1|6|U|242
5FCI|1|6|G|243
*
5FCI|1|6|C|250
5FCI|1|6|A|251
5FCI|1|6|U|252
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c1
- 40S ribosomal protein S11-A,40S ribosomal protein S11-A (uS17)
- Chain s4
- 40S ribosomal protein S4-A
- Chain s6
- 40S ribosomal protein S6-A
- Chain s8
- 40S ribosomal protein S8-A
Coloring options: