IL_5FCI_534

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGGG*UCUUUGUA

Length

12 nucleotides

Bulged bases

5FCI|1|5|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|5|U|169
5FCI|1|5|G|170
5FCI|1|5|G|171
5FCI|1|5|G|172
*
5FCI|1|5|U|246
5FCI|1|5|C|247
5FCI|1|5|U|248
5FCI|1|5|U|249
5FCI|1|5|U|250
5FCI|1|5|G|251
5FCI|1|5|U|252
5FCI|1|5|A|253

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain M3

60S ribosomal protein L13-A

Chain l8

60S ribosomal protein L8-A

Chain m3

60S ribosomal protein L13-A

Chain o5

60S ribosomal protein L35-A