IL_5FCJ_015
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_015 not in the Motif Atlas
- Homologous match to IL_8P9A_244
- Geometric discrepancy: 0.0591
- The information below is about IL_8P9A_244
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
5FCJ|1|1|G|404
5FCJ|1|1|U|405
5FCJ|1|1|G|406
5FCJ|1|1|A|407
5FCJ|1|1|A|408
5FCJ|1|1|A|409
5FCJ|1|1|U|410
*
5FCJ|1|4|A|13
5FCJ|1|4|C|14
5FCJ|1|4|G|15
5FCJ|1|4|G|16
5FCJ|1|4|A|17
5FCJ|1|4|U|18
5FCJ|1|4|C|19
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain L4
- 60S ribosomal protein L4-A
- Chain M7
- 60S ribosomal protein L17-A
- Chain O2
- 60S ribosomal protein L32
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