IL_5FCJ_230
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUG*UA
- Length
- 5 nucleotides
- Bulged bases
- 5FCJ|1|2|U|1657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_230 not in the Motif Atlas
- Homologous match to IL_8P9A_458
- Geometric discrepancy: 0.5406
- The information below is about IL_8P9A_458
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
5FCJ|1|2|U|1656
5FCJ|1|2|U|1657
5FCJ|1|2|G|1658
*
5FCJ|1|2|U|1743
5FCJ|1|2|A|1744
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D3
- 40S ribosomal protein S23-A
- Chain N3
- 60S ribosomal protein L23-A
- Chain Q1
- 60S ribosomal protein L41-A
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